Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.62■■□□□ 1.53
COL5A2P05997 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL5A2P05997 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
COL5A2P05997 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 AC139887.3-201ENST00000568585 713 ntBASIC24.61■■□□□ 1.53
COL5A2P05997 AL591684.3-201ENST00000605187 298 ntBASIC24.61■■□□□ 1.53
COL5A2P05997 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
COL5A2P05997 AC068587.9-201ENST00000641814 219 ntBASIC24.61■■□□□ 1.53
COL5A2P05997 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.61■■□□□ 1.53
COL5A2P05997 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL5A2P05997 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
COL5A2P05997 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC24.6■■□□□ 1.53
COL5A2P05997 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
COL5A2P05997 CCS-201ENST00000310190 942 ntTSL 5 BASIC24.6■■□□□ 1.53
COL5A2P05997 FGFR3P6-201ENST00000457012 610 ntBASIC24.6■■□□□ 1.53
COL5A2P05997 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
COL5A2P05997 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.6■■□□□ 1.53
COL5A2P05997 MIR5100-201ENST00000579544 119 ntBASIC24.6■■□□□ 1.53
COL5A2P05997 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL5A2P05997 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.6■■□□□ 1.53
COL5A2P05997 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL5A2P05997 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
COL5A2P05997 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL5A2P05997 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL5A2P05997 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.59■■□□□ 1.53
COL5A2P05997 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC24.59■■□□□ 1.53
COL5A2P05997 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
COL5A2P05997 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC24.59■■□□□ 1.53
COL5A2P05997 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
COL5A2P05997 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.59■■□□□ 1.53
COL5A2P05997 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.59■■□□□ 1.53
COL5A2P05997 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 KRT8P50-201ENST00000562022 1438 ntBASIC24.59■■□□□ 1.53
COL5A2P05997 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL5A2P05997 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.58■■□□□ 1.53
COL5A2P05997 FAM220CP-201ENST00000395253 831 ntBASIC24.58■■□□□ 1.53
COL5A2P05997 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL5A2P05997 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.58■■□□□ 1.53
COL5A2P05997 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC24.58■■□□□ 1.53
COL5A2P05997 PIN1-206ENST00000587625 878 ntTSL 2 BASIC24.58■■□□□ 1.53
COL5A2P05997 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC24.58■■□□□ 1.53
COL5A2P05997 AL355877.3-201ENST00000622820 899 ntBASIC24.58■■□□□ 1.53
COL5A2P05997 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL5A2P05997 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL5A2P05997 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL5A2P05997 FEM1AP3-201ENST00000403722 1741 ntBASIC24.58■■□□□ 1.53
COL5A2P05997 IRX1P1-201ENST00000438849 1838 ntBASIC24.58■■□□□ 1.53
COL5A2P05997 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL5A2P05997 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
COL5A2P05997 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
COL5A2P05997 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
COL5A2P05997 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.58■■□□□ 1.52
COL5A2P05997 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.58■■□□□ 1.52
COL5A2P05997 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.58■■□□□ 1.52
COL5A2P05997 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC24.58■■□□□ 1.52
COL5A2P05997 AC073648.2-201ENST00000510116 352 ntBASIC24.58■■□□□ 1.52
COL5A2P05997 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC24.58■■□□□ 1.52
COL5A2P05997 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC24.58■■□□□ 1.52
COL5A2P05997 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC24.58■■□□□ 1.52
COL5A2P05997 FAM215A-202ENST00000632077 792 ntBASIC24.58■■□□□ 1.52
COL5A2P05997 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
COL5A2P05997 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL5A2P05997 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL5A2P05997 PMS2P7-201ENST00000506558 1336 ntBASIC24.57■■□□□ 1.52
COL5A2P05997 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.57■■□□□ 1.52
COL5A2P05997 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL5A2P05997 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL5A2P05997 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL5A2P05997 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
COL5A2P05997 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.57■■□□□ 1.52
COL5A2P05997 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL5A2P05997 PGAM5P1-201ENST00000518923 814 ntBASIC24.57■■□□□ 1.52
COL5A2P05997 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.57■■□□□ 1.52
COL5A2P05997 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.57■■□□□ 1.52
COL5A2P05997 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
COL5A2P05997 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
COL5A2P05997 Z98044.1-201ENST00000632503 1764 ntBASIC24.56■■□□□ 1.52
COL5A2P05997 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.56■■□□□ 1.52
COL5A2P05997 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms