Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
MT-CO1P00395 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-CO1P00395 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MT-CO1P00395 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MT-CO1P00395 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MT-CO1P00395 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 AL512353.2-201ENST00000448759 1962 ntBASIC19.17■□□□□ 0.66
MT-CO1P00395 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 AK4P3-201ENST00000418260 669 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 COX11P1-201ENST00000489116 835 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 YBX1P2-201ENST00000489612 999 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-CO1P00395 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-CO1P00395 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-CO1P00395 AL512604.3-201ENST00000569583 964 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 WWOX-216ENST00000569818 525 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-CO1P00395 AC011558.1-201ENST00000623459 338 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO1P00395 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO1P00395 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-CO1P00395 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.16■□□□□ 0.66
MT-CO1P00395 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.15■□□□□ 0.66
MT-CO1P00395 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MT-CO1P00395 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.15■□□□□ 0.66
MT-CO1P00395 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.15■□□□□ 0.66
MT-CO1P00395 AC009947.2-201ENST00000444014 672 ntBASIC19.15■□□□□ 0.66
MT-CO1P00395 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 AL445228.2-201ENST00000605589 952 ntBASIC19.15■□□□□ 0.66
MT-CO1P00395 AL023973.1-201ENST00000624619 620 ntBASIC19.15■□□□□ 0.66
MT-CO1P00395 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-CO1P00395 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO1P00395 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.15■□□□□ 0.66
MT-CO1P00395 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.14■□□□□ 0.66
MT-CO1P00395 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MT-CO1P00395 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MT-CO1P00395 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.14■□□□□ 0.66
MT-CO1P00395 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.14■□□□□ 0.66
MT-CO1P00395 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MT-CO1P00395 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.14■□□□□ 0.65
MT-CO1P00395 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-CO1P00395 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO1P00395 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO1P00395 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-CO1P00395 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MT-CO1P00395 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
MT-CO1P00395 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO1P00395 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.14■□□□□ 0.65
MT-CO1P00395 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.14■□□□□ 0.65
MT-CO1P00395 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO1P00395 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.14■□□□□ 0.65
MT-CO1P00395 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO1P00395 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms