Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RIPK2O43353 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.03■□□□□ 0.64
RIPK2O43353 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.03■□□□□ 0.64
RIPK2O43353 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.03■□□□□ 0.64
RIPK2O43353 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.03■□□□□ 0.64
RIPK2O43353 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.03■□□□□ 0.64
RIPK2O43353 AC060766.5-201ENST00000590539 871 ntBASIC19.03■□□□□ 0.64
RIPK2O43353 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
RIPK2O43353 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RIPK2O43353 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 KRT8P32-201ENST00000512863 1461 ntBASIC19.03■□□□□ 0.64
RIPK2O43353 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RIPK2O43353 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.02■□□□□ 0.64
RIPK2O43353 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 AC112777.1-201ENST00000540175 1423 ntBASIC19.02■□□□□ 0.64
RIPK2O43353 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.02■□□□□ 0.64
RIPK2O43353 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RIPK2O43353 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.02■□□□□ 0.64
RIPK2O43353 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.02■□□□□ 0.64
RIPK2O43353 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RIPK2O43353 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.02■□□□□ 0.64
RIPK2O43353 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.02■□□□□ 0.64
RIPK2O43353 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.02■□□□□ 0.64
RIPK2O43353 MYC-209ENST00000641252 345 ntBASIC19.02■□□□□ 0.64
RIPK2O43353 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.02■□□□□ 0.64
RIPK2O43353 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIPK2O43353 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RIPK2O43353 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.01■□□□□ 0.63
RIPK2O43353 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 KRT8P45-201ENST00000414328 1447 ntBASIC19.01■□□□□ 0.63
RIPK2O43353 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.01■□□□□ 0.63
RIPK2O43353 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.01■□□□□ 0.63
RIPK2O43353 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.01■□□□□ 0.63
RIPK2O43353 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RIPK2O43353 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.01■□□□□ 0.63
RIPK2O43353 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 CROCCP5-201ENST00000436658 830 ntBASIC19.01■□□□□ 0.63
RIPK2O43353 AC026185.1-201ENST00000445748 174 ntBASIC19.01■□□□□ 0.63
RIPK2O43353 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.01■□□□□ 0.63
RIPK2O43353 RARRES2P6-201ENST00000567333 442 ntBASIC19.01■□□□□ 0.63
RIPK2O43353 C1QL1P1-201ENST00000568105 661 ntBASIC19.01■□□□□ 0.63
RIPK2O43353 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.01■□□□□ 0.63
RIPK2O43353 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.01■□□□□ 0.63
RIPK2O43353 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.01■□□□□ 0.63
RIPK2O43353 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.01■□□□□ 0.63
RIPK2O43353 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIPK2O43353 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RIPK2O43353 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.01■□□□□ 0.63
RIPK2O43353 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RIPK2O43353 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.01■□□□□ 0.63
RIPK2O43353 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RIPK2O43353 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
RIPK2O43353 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 AC008687.6-201ENST00000596318 630 ntBASIC19■□□□□ 0.63
RIPK2O43353 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 AC092437.1-201ENST00000624794 1048 ntBASIC19■□□□□ 0.63
RIPK2O43353 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms