Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD2O14647 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD2O14647 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC26.02■■□□□ 1.76
CHD2O14647 MIR5100-201ENST00000579544 119 ntBASIC26.02■■□□□ 1.76
CHD2O14647 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.02■■□□□ 1.76
CHD2O14647 KRT8P32-201ENST00000512863 1461 ntBASIC26.02■■□□□ 1.76
CHD2O14647 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 Z82202.1-201ENST00000623446 1880 ntBASIC26.02■■□□□ 1.76
CHD2O14647 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.02■■□□□ 1.76
CHD2O14647 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CHD2O14647 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CHD2O14647 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.02■■□□□ 1.76
CHD2O14647 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.02■■□□□ 1.76
CHD2O14647 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.02■■□□□ 1.76
CHD2O14647 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC26.02■■□□□ 1.76
CHD2O14647 FAM197Y3-203ENST00000618346 717 ntBASIC26.02■■□□□ 1.76
CHD2O14647 AC116407.3-201ENST00000623905 1129 ntBASIC26.02■■□□□ 1.76
CHD2O14647 FAM215A-202ENST00000632077 792 ntBASIC26.02■■□□□ 1.76
CHD2O14647 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD2O14647 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
CHD2O14647 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
CHD2O14647 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC26.01■■□□□ 1.75
CHD2O14647 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHD2O14647 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CHD2O14647 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
CHD2O14647 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.01■■□□□ 1.75
CHD2O14647 AP001160.2-201ENST00000596071 487 ntBASIC26.01■■□□□ 1.75
CHD2O14647 AP001269.4-201ENST00000609611 512 ntBASIC26.01■■□□□ 1.75
CHD2O14647 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.01■■□□□ 1.75
CHD2O14647 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CHD2O14647 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CHD2O14647 YBX2P1-201ENST00000394192 760 ntBASIC26■■□□□ 1.75
CHD2O14647 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CHD2O14647 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC26■■□□□ 1.75
CHD2O14647 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC26■■□□□ 1.75
CHD2O14647 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC26■■□□□ 1.75
CHD2O14647 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD2O14647 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CHD2O14647 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CHD2O14647 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
CHD2O14647 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 GPX1P2-201ENST00000429271 606 ntBASIC25.99■■□□□ 1.75
CHD2O14647 THAP5-204ENST00000438865 868 ntTSL 2 BASIC25.99■■□□□ 1.75
CHD2O14647 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD2O14647 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
CHD2O14647 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHD2O14647 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC25.98■■□□□ 1.75
CHD2O14647 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHD2O14647 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHD2O14647 MED15P5-201ENST00000423150 992 ntBASIC25.98■■□□□ 1.75
CHD2O14647 AC113404.2-201ENST00000507884 177 ntBASIC25.98■■□□□ 1.75
CHD2O14647 AC012640.2-201ENST00000561606 901 ntBASIC25.98■■□□□ 1.75
CHD2O14647 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC25.98■■□□□ 1.75
CHD2O14647 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHD2O14647 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.98■■□□□ 1.75
CHD2O14647 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHD2O14647 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CHD2O14647 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD2O14647 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC25.97■■□□□ 1.75
CHD2O14647 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD2O14647 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHD2O14647 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHD2O14647 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
CHD2O14647 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD2O14647 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD2O14647 AC027796.2-201ENST00000575326 344 ntBASIC25.97■■□□□ 1.75
CHD2O14647 ANKRD20A8P-203ENST00000641373 517 ntBASIC25.97■■□□□ 1.75
CHD2O14647 KRT8P50-201ENST00000562022 1438 ntBASIC25.97■■□□□ 1.75
CHD2O14647 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC25.96■■□□□ 1.75
CHD2O14647 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms