Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 AL023284.2-201ENST00000405850 579 ntBASIC19.96■□□□□ 0.79
O00370 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
O00370 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.96■□□□□ 0.79
O00370 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.96■□□□□ 0.79
O00370 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.96■□□□□ 0.79
O00370 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
O00370 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 HEIH-201ENST00000623091 1652 ntBASIC19.96■□□□□ 0.79
O00370 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.96■□□□□ 0.79
O00370 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
O00370 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 RCC2P3-201ENST00000418112 1537 ntBASIC19.96■□□□□ 0.79
O00370 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
O00370 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
O00370 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.96■□□□□ 0.79
O00370 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
O00370 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.95■□□□□ 0.78
O00370 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.95■□□□□ 0.78
O00370 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.95■□□□□ 0.78
O00370 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.95■□□□□ 0.78
O00370 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
O00370 AC145285.6-201ENST00000604632 637 ntBASIC19.95■□□□□ 0.78
O00370 AC012306.2-201ENST00000609350 630 ntBASIC19.95■□□□□ 0.78
O00370 FAM87A-204ENST00000613235 858 ntBASIC19.95■□□□□ 0.78
O00370 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
O00370 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
O00370 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.95■□□□□ 0.78
O00370 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
O00370 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.95■□□□□ 0.78
O00370 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
O00370 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
O00370 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
O00370 LINC01568-207ENST00000641790 1380 ntBASIC19.95■□□□□ 0.78
O00370 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.95■□□□□ 0.78
O00370 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
O00370 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
O00370 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
O00370 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.94■□□□□ 0.78
O00370 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
O00370 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.94■□□□□ 0.78
O00370 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
O00370 AC010653.2-201ENST00000623505 997 ntBASIC19.94■□□□□ 0.78
O00370 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.94■□□□□ 0.78
O00370 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.94■□□□□ 0.78
O00370 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
O00370 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
O00370 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.94■□□□□ 0.78
O00370 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.94■□□□□ 0.78
O00370 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.94■□□□□ 0.78
O00370 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
O00370 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 AL031598.1-201ENST00000561511 1773 ntBASIC19.93■□□□□ 0.78
O00370 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
O00370 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.93■□□□□ 0.78
O00370 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 MTMR9LP-203ENST00000426597 1545 ntBASIC19.93■□□□□ 0.78
O00370 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.93■□□□□ 0.78
O00370 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
O00370 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
O00370 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
O00370 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.93■□□□□ 0.78
O00370 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.93■□□□□ 0.78
O00370 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.93■□□□□ 0.78
O00370 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 AC097493.4-201ENST00000641197 219 ntBASIC19.93■□□□□ 0.78
O00370 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.93■□□□□ 0.78
O00370 AL109659.2-201ENST00000606809 1674 ntBASIC19.93■□□□□ 0.78
O00370 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
O00370 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.93■□□□□ 0.78
O00370 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.92■□□□□ 0.78
O00370 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.92■□□□□ 0.78
O00370 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms