Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 AC068338.2-201ENST00000563278 1430 ntBASIC13.7□□□□□ -0.22
SMKR1H3BMG3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 AC135776.1-201ENST00000319817 2481 ntBASIC13.7□□□□□ -0.22
SMKR1H3BMG3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.7□□□□□ -0.22
SMKR1H3BMG3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 AC080080.1-201ENST00000625121 2420 ntBASIC13.69□□□□□ -0.22
SMKR1H3BMG3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMKR1H3BMG3 FER1L4-210ENST00000615531 5998 ntBASIC13.68□□□□□ -0.22
SMKR1H3BMG3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 AL499627.1-201ENST00000569373 2188 ntBASIC13.68□□□□□ -0.22
SMKR1H3BMG3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.68□□□□□ -0.22
SMKR1H3BMG3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 KRT17P1-201ENST00000399211 1546 ntBASIC13.68□□□□□ -0.22
SMKR1H3BMG3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMKR1H3BMG3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMKR1H3BMG3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms