Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV21A0A0B4J279 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 AC069152.1-201ENST00000438030 544 ntBASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV21A0A0B4J279 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AC098934.4-201ENST00000564127 592 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AL162741.1-201ENST00000565563 1558 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AL109923.1-201ENST00000618799 583 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 MYC-208ENST00000641036 567 ntBASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV21A0A0B4J279 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms