Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 ANO7L1-203ENST00000602586 1720 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 KRT8P50-201ENST00000562022 1438 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 AP000523.1-201ENST00000398242 1049 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 TSPY5P-201ENST00000426936 936 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 KRT18P23-201ENST00000435622 1283 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 AC024243.1-201ENST00000609234 778 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 AC112497.1-201ENST00000624824 639 ntBASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN16Q9Y5I7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 AC104390.1-201ENST00000555663 520 ntBASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 AL031432.5-201ENST00000641059 760 ntBASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN16Q9Y5I7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 KRT18P38-201ENST00000449496 1282 ntBASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms