Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 AC005363.2-201ENST00000618631 242 ntBASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA4Q9UN74 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AC113347.1-201ENST00000413321 391 ntBASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 KRT18P41-201ENST00000518924 1277 ntBASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AC010203.1-204ENST00000548782 407 ntBASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AL138966.2-201ENST00000621997 464 ntBASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AC034236.2-201ENST00000606662 1610 ntBASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA4Q9UN74 AL499627.1-201ENST00000569373 2188 ntBASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA4Q9UN74 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA4Q9UN74 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 TERF1P1-201ENST00000311003 1181 ntBASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 AC009947.2-201ENST00000444014 672 ntBASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms