Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 TSSC2-201ENST00000450217 709 ntBASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 BX276092.5-203ENST00000456199 560 ntBASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 AC093458.2-201ENST00000623150 629 ntBASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SYNPO2Q9UMS6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 HCG4P8-203ENST00000443049 980 ntBASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AC016734.2-201ENST00000624325 1377 ntBASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.56■■□□□ 1.04
SYNPO2Q9UMS6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 AL163051.1-201ENST00000569214 1512 ntBASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPO2Q9UMS6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPO2Q9UMS6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 CHCHD2P8-201ENST00000429873 447 ntBASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 KRT18P48-201ENST00000434763 852 ntBASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.53■■□□□ 1.04
SYNPO2Q9UMS6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPO2Q9UMS6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms