Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 HLA-F-220ENST00000434407 884 ntBASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 FDX1P1-201ENST00000449115 551 ntBASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 UNC93B7-201ENST00000509439 705 ntBASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 GCSHP2-201ENST00000560971 527 ntBASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 IFNL4P1-201ENST00000607083 540 ntBASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 NPAP1P7-201ENST00000613027 823 ntBASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 KRT8P11-201ENST00000409686 1436 ntBASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NOTCH3Q9UM47 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 AP002383.4-201ENST00000442518 975 ntBASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NOTCH3Q9UM47 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NOTCH3Q9UM47 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 AC246785.2-201ENST00000432512 513 ntBASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 AC004263.2-201ENST00000617183 678 ntBASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms