Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 AC034236.2-201ENST00000606662 1610 ntBASIC21.73■■□□□ 1.07
RBM28Q9NW13 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 AC113347.1-201ENST00000413321 391 ntBASIC21.72■■□□□ 1.07
RBM28Q9NW13 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 KRT18P41-201ENST00000518924 1277 ntBASIC21.72■■□□□ 1.07
RBM28Q9NW13 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.72■■□□□ 1.07
RBM28Q9NW13 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBM28Q9NW13 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 ECEL1P3-201ENST00000427961 737 ntBASIC21.71■■□□□ 1.07
RBM28Q9NW13 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RBM28Q9NW13 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBM28Q9NW13 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
RBM28Q9NW13 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.7■■□□□ 1.07
RBM28Q9NW13 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.07
RBM28Q9NW13 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 LIN28AP1-201ENST00000429574 405 ntBASIC21.7■■□□□ 1.06
RBM28Q9NW13 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.7■■□□□ 1.06
RBM28Q9NW13 AL138966.2-201ENST00000621997 464 ntBASIC21.7■■□□□ 1.06
RBM28Q9NW13 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 MYC-208ENST00000641036 567 ntBASIC21.7■■□□□ 1.06
RBM28Q9NW13 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RBM28Q9NW13 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 KRT8P7-201ENST00000533003 1432 ntBASIC21.7■■□□□ 1.06
RBM28Q9NW13 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBM28Q9NW13 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RBM28Q9NW13 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms