Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RN7SL510P-201ENST00000581311 263 ntBASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 Z83836.1-201ENST00000624605 1642 ntBASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 TPSP2-201ENST00000561760 610 ntBASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP3Q9H6T3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP3Q9H6T3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP3Q9H6T3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
RPAP3Q9H6T3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP3Q9H6T3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RPAP3Q9H6T3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 PVRIG2P-201ENST00000435460 978 ntBASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 UNC93B7-201ENST00000509439 705 ntBASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RPAP3Q9H6T3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 LINC00265-3P-201ENST00000447588 903 ntBASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 AC111152.3-201ENST00000569699 673 ntBASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 AC005332.3-201ENST00000589904 676 ntBASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 AC068587.9-201ENST00000641814 219 ntBASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RPAP3Q9H6T3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AL845331.1-201ENST00000424978 1190 ntBASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AC246785.2-201ENST00000432512 513 ntBASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 DRAXINP1-201ENST00000437611 948 ntBASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 NUS1P1-201ENST00000446295 882 ntBASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AP003733.1-201ENST00000491725 852 ntBASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms