Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 AC124864.1-201ENST00000623408 392 ntBASIC20.47■□□□□ 0.87
HIPK3Q9H422 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.47■□□□□ 0.87
HIPK3Q9H422 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIPK3Q9H422 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.46■□□□□ 0.87
HIPK3Q9H422 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 GUSBP12-201ENST00000513727 720 ntBASIC20.46■□□□□ 0.87
HIPK3Q9H422 REXO1L6P-202ENST00000619970 1078 ntBASIC20.46■□□□□ 0.87
HIPK3Q9H422 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.46■□□□□ 0.87
HIPK3Q9H422 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIPK3Q9H422 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 TCF3P1-201ENST00000423021 1937 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 IGHGP-201ENST00000390555 1178 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 PMS2P1-201ENST00000431037 1228 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 VENTXP7-201ENST00000475503 772 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 AC064862.7-201ENST00000604520 867 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 AC117500.6-201ENST00000624871 588 ntBASIC20.45■□□□□ 0.86
HIPK3Q9H422 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIPK3Q9H422 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.45■□□□□ 0.86
HIPK3Q9H422 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 NSUN5P1-202ENST00000421140 1535 ntBASIC20.44■□□□□ 0.86
HIPK3Q9H422 NSUN5P2-203ENST00000457352 1529 ntBASIC20.44■□□□□ 0.86
HIPK3Q9H422 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 MIR564-202ENST00000385049 94 ntBASIC20.44■□□□□ 0.86
HIPK3Q9H422 NUS1P2-201ENST00000417358 873 ntBASIC20.44■□□□□ 0.86
HIPK3Q9H422 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIPK3Q9H422 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.44■□□□□ 0.86
HIPK3Q9H422 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms