Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.46□□□□□ -0.1
SHANK2-AS3Q9BTD1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 KRT8P11-201ENST00000409686 1436 ntBASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 KRT16P5-201ENST00000455284 522 ntBASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 HTR7P1-202ENST00000624664 4411 ntBASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHANK2-AS3Q9BTD1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 KRT8P32-201ENST00000512863 1461 ntBASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 AC239809.2-201ENST00000415381 517 ntBASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 PRSS44-201ENST00000515154 1146 ntBASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 AL445675.2-201ENST00000620291 557 ntBASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHANK2-AS3Q9BTD1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 AL133373.2-201ENST00000623187 2828 ntBASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 KRT8P3-201ENST00000519669 1449 ntBASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHANK2-AS3Q9BTD1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms