Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RARRES2P4-201ENST00000514074 484 ntBASIC12.49□□□□□ -0.41
LITAFQ99732 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.49□□□□□ -0.41
LITAFQ99732 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 AC106739.1-201ENST00000617035 715 ntBASIC12.49□□□□□ -0.41
LITAFQ99732 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 AL136967.2-201ENST00000623968 743 ntBASIC12.49□□□□□ -0.41
LITAFQ99732 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LITAFQ99732 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.48□□□□□ -0.41
LITAFQ99732 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 AL023806.1-201ENST00000603994 1649 ntBASIC12.48□□□□□ -0.41
LITAFQ99732 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LITAFQ99732 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC12.48□□□□□ -0.41
LITAFQ99732 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.48□□□□□ -0.41
LITAFQ99732 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 AC010536.3-201ENST00000620306 533 ntBASIC12.48□□□□□ -0.41
LITAFQ99732 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.48□□□□□ -0.41
LITAFQ99732 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LITAFQ99732 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LITAFQ99732 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LITAFQ99732 AL121761.2-201ENST00000598007 1648 ntBASIC12.48□□□□□ -0.41
LITAFQ99732 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.47□□□□□ -0.41
LITAFQ99732 LINC00602-201ENST00000629776 2065 ntBASIC12.47□□□□□ -0.41
LITAFQ99732 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.47□□□□□ -0.41
LITAFQ99732 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
LITAFQ99732 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
LITAFQ99732 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 CYP2T3P-201ENST00000601990 817 ntBASIC12.47□□□□□ -0.41
LITAFQ99732 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LITAFQ99732 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms