Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 TREX1-205ENST00000625293 1783 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 YBX1P5-201ENST00000509441 847 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 AL592071.1-201ENST00000611956 408 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 PHGDH-210ENST00000641115 1638 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 MTDHP5-201ENST00000598980 586 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 MINOS1P3-201ENST00000457048 203 ntBASIC18.36■□□□□ 0.53
CFAP54Q96N23 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CFAP54Q96N23 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.36■□□□□ 0.53
CFAP54Q96N23 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 AC121338.2-201ENST00000622535 1744 ntBASIC18.35■□□□□ 0.53
CFAP54Q96N23 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 RPS2P28-201ENST00000314255 741 ntBASIC18.35■□□□□ 0.53
CFAP54Q96N23 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 DUX4L17-201ENST00000557360 1267 ntBASIC18.35■□□□□ 0.53
CFAP54Q96N23 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 FEM1AP1-201ENST00000431297 1995 ntBASIC18.35■□□□□ 0.53
CFAP54Q96N23 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CFAP54Q96N23 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CFAP54Q96N23 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 GK-202ENST00000378941 458 ntTSL 3 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 MIR3917-201ENST00000580971 93 ntBASIC18.34■□□□□ 0.53
CFAP54Q96N23 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CFAP54Q96N23 AL355877.3-201ENST00000622820 899 ntBASIC18.34■□□□□ 0.53
CFAP54Q96N23 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CFAP54Q96N23 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CFAP54Q96N23 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CFAP54Q96N23 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.33■□□□□ 0.53
CFAP54Q96N23 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CFAP54Q96N23 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CFAP54Q96N23 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.33■□□□□ 0.53
CFAP54Q96N23 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CFAP54Q96N23 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CFAP54Q96N23 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.33■□□□□ 0.53
CFAP54Q96N23 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms