Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 AC231657.2-201ENST00000624556 255 ntBASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 AC068338.2-201ENST00000563278 1430 ntBASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 AC084018.2-201ENST00000613093 2607 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 AL645608.8-201ENST00000606034 2086 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 CNN2P6-201ENST00000439038 900 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 AL137784.2-201ENST00000607332 1000 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 AC135776.1-201ENST00000319817 2481 ntBASIC18.88■□□□□ 0.61
CHMP6Q96FZ7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 RARRES2P4-201ENST00000514074 484 ntBASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 AC141586.5-201ENST00000624546 2050 ntBASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP6Q96FZ7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 AC080080.1-201ENST00000625121 2420 ntBASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms