Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 AL691432.3-201ENST00000621860 400 ntBASIC18.79■□□□□ 0.6
SIPA1Q96FS4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 AL391807.1-203ENST00000604392 2365 ntBASIC18.79■□□□□ 0.6
SIPA1Q96FS4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 TPM4P1-201ENST00000436100 807 ntBASIC18.78■□□□□ 0.6
SIPA1Q96FS4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 MIR3652-201ENST00000579335 131 ntBASIC18.78■□□□□ 0.6
SIPA1Q96FS4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.78■□□□□ 0.6
SIPA1Q96FS4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.6
SIPA1Q96FS4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 HOXB1-202ENST00000577092 1414 ntBASIC18.77■□□□□ 0.6
SIPA1Q96FS4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 KRT8P26-201ENST00000534154 1276 ntBASIC18.77■□□□□ 0.6
SIPA1Q96FS4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AC104390.1-201ENST00000555663 520 ntBASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.77■□□□□ 0.6
SIPA1Q96FS4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
SIPA1Q96FS4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.77■□□□□ 0.59
SIPA1Q96FS4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 MIR662-201ENST00000384847 95 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 MIR564-202ENST00000385049 94 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 PRELID1P1-202ENST00000567272 903 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms