Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR1Q969H4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 AC093909.1-201ENST00000504731 1122 ntBASIC22.92■■□□□ 1.26
CNKSR1Q969H4 RNPS1P1-201ENST00000507437 918 ntBASIC22.92■■□□□ 1.26
CNKSR1Q969H4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 AL591684.3-201ENST00000605187 298 ntBASIC22.92■■□□□ 1.26
CNKSR1Q969H4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR1Q969H4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.91■■□□□ 1.26
CNKSR1Q969H4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR1Q969H4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC092865.5-201ENST00000545435 363 ntBASIC22.9■■□□□ 1.26
CNKSR1Q969H4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC009065.1-201ENST00000564055 1225 ntBASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC106730.1-201ENST00000566722 1090 ntBASIC22.9■■□□□ 1.26
CNKSR1Q969H4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 MIR5100-201ENST00000579544 119 ntBASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 TEX21P-204ENST00000641479 1693 ntBASIC22.9■■□□□ 1.26
CNKSR1Q969H4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.9■■□□□ 1.26
CNKSR1Q969H4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CNKSR1Q969H4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.89■■□□□ 1.26
CNKSR1Q969H4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.89■■□□□ 1.26
CNKSR1Q969H4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 MIR1233-2-201ENST00000408138 82 ntBASIC22.89■■□□□ 1.25
CNKSR1Q969H4 MIR1233-1-201ENST00000408722 82 ntBASIC22.89■■□□□ 1.25
CNKSR1Q969H4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 BNIP3P18-201ENST00000593976 575 ntBASIC22.89■■□□□ 1.25
CNKSR1Q969H4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR1Q969H4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR1Q969H4 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.88■■□□□ 1.25
CNKSR1Q969H4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.88■■□□□ 1.25
CNKSR1Q969H4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms