Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.31■□□□□ 0.2
USP9XQ93008 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
USP9XQ93008 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
USP9XQ93008 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.31■□□□□ 0.2
USP9XQ93008 AP003733.1-201ENST00000491725 852 ntBASIC16.31■□□□□ 0.2
USP9XQ93008 GUSBP12-201ENST00000513727 720 ntBASIC16.31■□□□□ 0.2
USP9XQ93008 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.31■□□□□ 0.2
USP9XQ93008 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.31■□□□□ 0.2
USP9XQ93008 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP9XQ93008 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
USP9XQ93008 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
USP9XQ93008 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP9XQ93008 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP9XQ93008 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 ZNF815P-204ENST00000434898 1737 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP9XQ93008 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.3■□□□□ 0.2
USP9XQ93008 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.3■□□□□ 0.2
USP9XQ93008 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP9XQ93008 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP9XQ93008 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
USP9XQ93008 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 AC023274.1-201ENST00000418278 595 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 COX20P2-201ENST00000452636 358 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.3■□□□□ 0.2
USP9XQ93008 SPCS2P1-201ENST00000561636 679 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.3■□□□□ 0.2
USP9XQ93008 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
USP9XQ93008 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.29■□□□□ 0.2
USP9XQ93008 SDHAP1-207ENST00000440850 2000 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
USP9XQ93008 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 AC002347.1-201ENST00000569543 541 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.29■□□□□ 0.2
USP9XQ93008 AC024563.2-201ENST00000603282 481 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 AL035252.4-201ENST00000624174 288 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.29■□□□□ 0.2
USP9XQ93008 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.29■□□□□ 0.2
USP9XQ93008 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.29■□□□□ 0.2
USP9XQ93008 AL353692.3-201ENST00000407031 1396 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
USP9XQ93008 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP9XQ93008 AC040169.1-201ENST00000565382 521 ntBASIC16.29■□□□□ 0.2
USP9XQ93008 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.29■□□□□ 0.2
USP9XQ93008 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.29■□□□□ 0.2
USP9XQ93008 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.28■□□□□ 0.2
USP9XQ93008 AL109659.2-201ENST00000606809 1674 ntBASIC16.28■□□□□ 0.2
USP9XQ93008 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.28■□□□□ 0.2
USP9XQ93008 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
USP9XQ93008 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.28■□□□□ 0.2
USP9XQ93008 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.28■□□□□ 0.2
USP9XQ93008 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.28■□□□□ 0.2
USP9XQ93008 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.28■□□□□ 0.2
USP9XQ93008 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.28■□□□□ 0.2
USP9XQ93008 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
USP9XQ93008 AC009237.14-201ENST00000609975 1594 ntBASIC16.28■□□□□ 0.2
USP9XQ93008 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.28■□□□□ 0.2
USP9XQ93008 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
USP9XQ93008 CNN2P11-201ENST00000429351 262 ntBASIC16.28■□□□□ 0.2
USP9XQ93008 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP9XQ93008 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.27■□□□□ 0.2
USP9XQ93008 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms