Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 AF228730.7-201ENST00000641842 219 ntBASIC23.96■■□□□ 1.43
SMARCC1Q92922 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMARCC1Q92922 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 AL773604.1-201ENST00000617417 272 ntBASIC23.95■■□□□ 1.42
SMARCC1Q92922 AC139530.3-201ENST00000620344 690 ntBASIC23.95■■□□□ 1.42
SMARCC1Q92922 TP73-AS1-207ENST00000624167 988 ntBASIC23.95■■□□□ 1.42
SMARCC1Q92922 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC1Q92922 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
SMARCC1Q92922 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.94■■□□□ 1.42
SMARCC1Q92922 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 IL9RP2-201ENST00000423948 1312 ntBASIC23.94■■□□□ 1.42
SMARCC1Q92922 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 MIR574-201ENST00000385209 96 ntBASIC23.94■■□□□ 1.42
SMARCC1Q92922 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 AC009065.1-201ENST00000564055 1225 ntBASIC23.94■■□□□ 1.42
SMARCC1Q92922 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.94■■□□□ 1.42
SMARCC1Q92922 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC1Q92922 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 MINOS1P3-201ENST00000457048 203 ntBASIC23.93■■□□□ 1.42
SMARCC1Q92922 AC091607.1-201ENST00000490318 1060 ntBASIC23.93■■□□□ 1.42
SMARCC1Q92922 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 AC011840.4-201ENST00000578471 627 ntBASIC23.93■■□□□ 1.42
SMARCC1Q92922 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC1Q92922 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC1Q92922 AC092667.1-201ENST00000434301 2586 ntBASIC23.93■■□□□ 1.42
SMARCC1Q92922 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC1Q92922 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC1Q92922 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC1Q92922 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.91■■□□□ 1.42
SMARCC1Q92922 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms