Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC2Q8TAQ2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMARCC2Q8TAQ2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMARCC2Q8TAQ2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC2Q8TAQ2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC2Q8TAQ2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 KRT18P22-201ENST00000402024 1347 ntBASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms