Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 AC024243.1-201ENST00000609234 778 ntBASIC20.16■□□□□ 0.82
BEST2Q8NFU1 AC112497.1-201ENST00000624824 639 ntBASIC20.16■□□□□ 0.82
BEST2Q8NFU1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 AC083906.6-201ENST00000641366 219 ntBASIC20.15■□□□□ 0.82
BEST2Q8NFU1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST2Q8NFU1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
BEST2Q8NFU1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
BEST2Q8NFU1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BEST2Q8NFU1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BEST2Q8NFU1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BEST2Q8NFU1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 KRT8P7-201ENST00000533003 1432 ntBASIC20.14■□□□□ 0.81
BEST2Q8NFU1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 KRT18P23-201ENST00000435622 1283 ntBASIC20.14■□□□□ 0.81
BEST2Q8NFU1 AL359075.1-203ENST00000462729 1002 ntBASIC20.14■□□□□ 0.81
BEST2Q8NFU1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST2Q8NFU1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AC034236.2-201ENST00000606662 1610 ntBASIC20.13■□□□□ 0.81
BEST2Q8NFU1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AL031133.1-201ENST00000406807 723 ntBASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms