Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRK2Q5S007 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRK2Q5S007 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRK2Q5S007 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.23■□□□□ 0.19
LRRK2Q5S007 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AL078644.1-201ENST00000609881 752 ntBASIC16.23■□□□□ 0.19
LRRK2Q5S007 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRK2Q5S007 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRK2Q5S007 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 BCRP1-201ENST00000444246 691 ntBASIC16.22■□□□□ 0.19
LRRK2Q5S007 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AC011467.4-201ENST00000594891 528 ntBASIC16.22■□□□□ 0.19
LRRK2Q5S007 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRK2Q5S007 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AC002310.6-201ENST00000624451 1377 ntBASIC16.22■□□□□ 0.19
LRRK2Q5S007 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 AL109659.2-201ENST00000606809 1674 ntBASIC16.22■□□□□ 0.19
LRRK2Q5S007 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRK2Q5S007 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 AC007967.2-201ENST00000432613 625 ntBASIC16.21■□□□□ 0.19
LRRK2Q5S007 UNC93B6-202ENST00000528242 690 ntBASIC16.21■□□□□ 0.19
LRRK2Q5S007 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 AC025062.2-201ENST00000605477 670 ntBASIC16.21■□□□□ 0.19
LRRK2Q5S007 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 MIR1199-201ENST00000621445 119 ntBASIC16.21■□□□□ 0.19
LRRK2Q5S007 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 MTDHP3-201ENST00000594186 672 ntBASIC16.21■□□□□ 0.19
LRRK2Q5S007 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRK2Q5S007 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRK2Q5S007 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.21■□□□□ 0.18
LRRK2Q5S007 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRK2Q5S007 KRT8P7-201ENST00000533003 1432 ntBASIC16.21■□□□□ 0.18
LRRK2Q5S007 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
LRRK2Q5S007 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRK2Q5S007 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms