Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AC106820.2-201ENST00000563775 3264 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AC093525.10-201ENST00000625130 1569 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 Z98044.1-201ENST00000632503 1764 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AP003097.1-201ENST00000530657 1135 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AC004264.1-201ENST00000608354 794 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 NBPF21P-201ENST00000425093 1451 ntBASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H1AQ02539 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 KRT17P3-201ENST00000420566 1262 ntBASIC14.34□□□□□ -0.11
HIST1H1AQ02539 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1AQ02539 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms