Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CBX1P83916 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.66■□□□□ 0.74
CBX1P83916 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CBX1P83916 TSPY26P-202ENST00000565928 3884 ntBASIC19.66■□□□□ 0.74
CBX1P83916 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 AC138028.4-201ENST00000564984 1845 ntBASIC19.66■□□□□ 0.74
CBX1P83916 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX1P83916 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CBX1P83916 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CBX1P83916 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CBX1P83916 AC105020.1-201ENST00000435356 2205 ntBASIC19.66■□□□□ 0.74
CBX1P83916 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX1P83916 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CBX1P83916 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX1P83916 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CBX1P83916 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX1P83916 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX1P83916 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX1P83916 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CBX1P83916 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CBX1P83916 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX1P83916 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX1P83916 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX1P83916 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CBX1P83916 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.64■□□□□ 0.74
CBX1P83916 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.64■□□□□ 0.74
CBX1P83916 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX1P83916 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.64■□□□□ 0.73
CBX1P83916 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CBX1P83916 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX1P83916 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX1P83916 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX1P83916 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CBX1P83916 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CBX1P83916 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CBX1P83916 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CBX1P83916 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CBX1P83916 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX1P83916 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX1P83916 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 SMUG1P1-201ENST00000590640 811 ntBASIC19.63■□□□□ 0.73
CBX1P83916 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX1P83916 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CBX1P83916 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms