Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SNRPFP62306 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.36■□□□□ 0.85
SNRPFP62306 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.36■□□□□ 0.85
SNRPFP62306 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNRPFP62306 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
SNRPFP62306 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.36■□□□□ 0.85
SNRPFP62306 NEK4P2-201ENST00000580004 1012 ntBASIC20.36■□□□□ 0.85
SNRPFP62306 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPFP62306 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SNRPFP62306 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.35■□□□□ 0.85
SNRPFP62306 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.35■□□□□ 0.85
SNRPFP62306 MIR3180-4-201ENST00000582223 153 ntBASIC20.35■□□□□ 0.85
SNRPFP62306 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNRPFP62306 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SNRPFP62306 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SNRPFP62306 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPFP62306 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SNRPFP62306 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.35■□□□□ 0.85
SNRPFP62306 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
SNRPFP62306 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SNRPFP62306 MYLKP1-201ENST00000509077 1580 ntBASIC20.34■□□□□ 0.85
SNRPFP62306 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SNRPFP62306 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.34■□□□□ 0.85
SNRPFP62306 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.34■□□□□ 0.85
SNRPFP62306 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SNRPFP62306 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.34■□□□□ 0.85
SNRPFP62306 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNRPFP62306 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPFP62306 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SNRPFP62306 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 WIZP1-201ENST00000531444 2299 ntBASIC20.33■□□□□ 0.85
SNRPFP62306 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SNRPFP62306 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.33■□□□□ 0.85
SNRPFP62306 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 AP000523.1-201ENST00000398242 1049 ntBASIC20.33■□□□□ 0.85
SNRPFP62306 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.33■□□□□ 0.85
SNRPFP62306 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.33■□□□□ 0.85
SNRPFP62306 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPFP62306 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.33■□□□□ 0.85
SNRPFP62306 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRPFP62306 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRPFP62306 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
SNRPFP62306 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRPFP62306 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRPFP62306 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms