Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CXCR4P61073 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.1■□□□□ 0.33
CXCR4P61073 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.1■□□□□ 0.33
CXCR4P61073 AC006557.6-201ENST00000623071 864 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CXCR4P61073 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CXCR4P61073 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 HEIH-201ENST00000623091 1652 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 AC093677.2-201ENST00000600169 1863 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CXCR4P61073 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CXCR4P61073 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
CXCR4P61073 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 TSPY21P-201ENST00000433481 731 ntBASIC17.09■□□□□ 0.33
CXCR4P61073 YBX1P10-201ENST00000444752 975 ntBASIC17.09■□□□□ 0.33
CXCR4P61073 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.09■□□□□ 0.33
CXCR4P61073 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.09■□□□□ 0.33
CXCR4P61073 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CXCR4P61073 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CXCR4P61073 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CXCR4P61073 AC099398.1-201ENST00000567919 2776 ntBASIC17.09■□□□□ 0.33
CXCR4P61073 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
CXCR4P61073 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CXCR4P61073 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CXCR4P61073 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CXCR4P61073 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CXCR4P61073 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CXCR4P61073 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CXCR4P61073 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.08■□□□□ 0.33
CXCR4P61073 AL645608.8-201ENST00000606034 2086 ntBASIC17.08■□□□□ 0.33
CXCR4P61073 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CXCR4P61073 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
CXCR4P61073 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.08■□□□□ 0.32
CXCR4P61073 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.08■□□□□ 0.32
CXCR4P61073 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.08■□□□□ 0.32
CXCR4P61073 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.08■□□□□ 0.32
CXCR4P61073 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
CXCR4P61073 MYC-208ENST00000641036 567 ntBASIC17.08■□□□□ 0.32
CXCR4P61073 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CXCR4P61073 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CXCR4P61073 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CXCR4P61073 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
CXCR4P61073 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.07■□□□□ 0.32
CXCR4P61073 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
CXCR4P61073 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CXCR4P61073 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 HTR7P1-202ENST00000624664 4411 ntBASIC17.07■□□□□ 0.32
CXCR4P61073 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 MIR663A-201ENST00000385250 93 ntBASIC17.07■□□□□ 0.32
CXCR4P61073 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CXCR4P61073 CDCA4P2-201ENST00000441182 718 ntBASIC17.07■□□□□ 0.32
CXCR4P61073 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CXCR4P61073 RPS2P52-201ENST00000469610 820 ntBASIC17.07■□□□□ 0.32
CXCR4P61073 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.07■□□□□ 0.32
CXCR4P61073 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.07■□□□□ 0.32
CXCR4P61073 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms