Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.98□□□□□ -0.17
CMC4P56277 AL023284.2-201ENST00000405850 579 ntBASIC13.98□□□□□ -0.17
CMC4P56277 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.98□□□□□ -0.17
CMC4P56277 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.98□□□□□ -0.17
CMC4P56277 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 AC140113.3-201ENST00000605663 199 ntBASIC13.98□□□□□ -0.17
CMC4P56277 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.98□□□□□ -0.17
CMC4P56277 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CMC4P56277 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMC4P56277 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 RCC2P3-201ENST00000418112 1537 ntBASIC13.97□□□□□ -0.17
CMC4P56277 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 AP000593.1-201ENST00000393668 712 ntBASIC13.97□□□□□ -0.17
CMC4P56277 AC113347.1-201ENST00000413321 391 ntBASIC13.97□□□□□ -0.17
CMC4P56277 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 BX664615.1-201ENST00000443558 458 ntBASIC13.97□□□□□ -0.17
CMC4P56277 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.97□□□□□ -0.17
CMC4P56277 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.97□□□□□ -0.17
CMC4P56277 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.97□□□□□ -0.17
CMC4P56277 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMC4P56277 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMC4P56277 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.97□□□□□ -0.17
CMC4P56277 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.96□□□□□ -0.17
CMC4P56277 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 MIR564-202ENST00000385049 94 ntBASIC13.96□□□□□ -0.17
CMC4P56277 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.96□□□□□ -0.17
CMC4P56277 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.96□□□□□ -0.17
CMC4P56277 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.96□□□□□ -0.17
CMC4P56277 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.96□□□□□ -0.17
CMC4P56277 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms