Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
APOC4P55056 IRX1P1-201ENST00000438849 1838 ntBASIC13.76□□□□□ -0.21
APOC4P55056 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 AL109659.2-201ENST00000606809 1674 ntBASIC13.75□□□□□ -0.21
APOC4P55056 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 RCC2P3-201ENST00000418112 1537 ntBASIC13.75□□□□□ -0.21
APOC4P55056 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 AL359075.1-203ENST00000462729 1002 ntBASIC13.75□□□□□ -0.21
APOC4P55056 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 AL441883.1-201ENST00000566170 1045 ntBASIC13.75□□□□□ -0.21
APOC4P55056 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.75□□□□□ -0.21
APOC4P55056 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.75□□□□□ -0.21
APOC4P55056 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC4P55056 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC4P55056 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC4P55056 AL158211.5-201ENST00000623583 2518 ntBASIC13.74□□□□□ -0.21
APOC4P55056 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 AL512353.2-201ENST00000448759 1962 ntBASIC13.74□□□□□ -0.21
APOC4P55056 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 KRT8P7-201ENST00000533003 1432 ntBASIC13.74□□□□□ -0.21
APOC4P55056 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 AL671277.2-201ENST00000458060 996 ntBASIC13.74□□□□□ -0.21
APOC4P55056 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.74□□□□□ -0.21
APOC4P55056 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.74□□□□□ -0.21
APOC4P55056 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.74□□□□□ -0.21
APOC4P55056 AC091076.1-201ENST00000610741 619 ntBASIC13.74□□□□□ -0.21
APOC4P55056 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC4P55056 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOC4P55056 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOC4P55056 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOC4P55056 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC4P55056 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
APOC4P55056 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
APOC4P55056 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC4P55056 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOC4P55056 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 STARP1-201ENST00000397973 869 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms