Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 MIR3917-201ENST00000580971 93 ntBASIC18.05■□□□□ 0.48
EPHA4P54764 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
EPHA4P54764 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EPHA4P54764 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHA4P54764 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA4P54764 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
EPHA4P54764 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA4P54764 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA4P54764 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA4P54764 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
EPHA4P54764 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.04■□□□□ 0.48
EPHA4P54764 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
EPHA4P54764 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA4P54764 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHA4P54764 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHA4P54764 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.03■□□□□ 0.48
EPHA4P54764 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHA4P54764 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
EPHA4P54764 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 AC034236.2-201ENST00000606662 1610 ntBASIC18.03■□□□□ 0.48
EPHA4P54764 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA4P54764 SPDYE13P-201ENST00000445314 798 ntBASIC18.03■□□□□ 0.48
EPHA4P54764 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA4P54764 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.03■□□□□ 0.48
EPHA4P54764 AC104390.1-201ENST00000555663 520 ntBASIC18.03■□□□□ 0.48
EPHA4P54764 AC069148.1-201ENST00000608741 768 ntBASIC18.03■□□□□ 0.48
EPHA4P54764 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.03■□□□□ 0.48
EPHA4P54764 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA4P54764 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA4P54764 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
EPHA4P54764 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHA4P54764 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA4P54764 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA4P54764 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 AL645929.1-201ENST00000420084 975 ntBASIC18.02■□□□□ 0.48
EPHA4P54764 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHA4P54764 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA4P54764 AC092597.1-201ENST00000487352 616 ntBASIC18.02■□□□□ 0.48
EPHA4P54764 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA4P54764 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.02■□□□□ 0.48
EPHA4P54764 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.02■□□□□ 0.48
EPHA4P54764 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA4P54764 MIR3180-4-201ENST00000582223 153 ntBASIC18.02■□□□□ 0.48
EPHA4P54764 AL032819.2-201ENST00000624543 2162 ntBASIC18.02■□□□□ 0.48
EPHA4P54764 AC068587.9-201ENST00000641814 219 ntBASIC18.02■□□□□ 0.48
EPHA4P54764 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA4P54764 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA4P54764 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA4P54764 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA4P54764 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
EPHA4P54764 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.01■□□□□ 0.47
EPHA4P54764 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms