Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.08■□□□□ 0.97
HTTP42858 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
HTTP42858 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
HTTP42858 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HTTP42858 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
HTTP42858 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.08■□□□□ 0.96
HTTP42858 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTTP42858 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.07■□□□□ 0.96
HTTP42858 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
HTTP42858 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.07■□□□□ 0.96
HTTP42858 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.07■□□□□ 0.96
HTTP42858 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.07■□□□□ 0.96
HTTP42858 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HTTP42858 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.07■□□□□ 0.96
HTTP42858 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HTTP42858 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.07■□□□□ 0.96
HTTP42858 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.07■□□□□ 0.96
HTTP42858 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.07■□□□□ 0.96
HTTP42858 ZNF259P1-201ENST00000407656 1365 ntBASIC21.07■□□□□ 0.96
HTTP42858 AL109659.2-201ENST00000606809 1674 ntBASIC21.07■□□□□ 0.96
HTTP42858 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.07■□□□□ 0.96
HTTP42858 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTTP42858 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.07■□□□□ 0.96
HTTP42858 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTTP42858 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.06■□□□□ 0.96
HTTP42858 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HTTP42858 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.06■□□□□ 0.96
HTTP42858 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.06■□□□□ 0.96
HTTP42858 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.06■□□□□ 0.96
HTTP42858 IGHV3-41-201ENST00000613121 348 ntBASIC21.06■□□□□ 0.96
HTTP42858 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.06■□□□□ 0.96
HTTP42858 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTTP42858 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.06■□□□□ 0.96
HTTP42858 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.06■□□□□ 0.96
HTTP42858 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.06■□□□□ 0.96
HTTP42858 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HTTP42858 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
HTTP42858 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTTP42858 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.06■□□□□ 0.96
HTTP42858 AC114341.1-201ENST00000618070 349 ntBASIC21.06■□□□□ 0.96
HTTP42858 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HTTP42858 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTTP42858 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.06■□□□□ 0.96
HTTP42858 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.05■□□□□ 0.96
HTTP42858 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.05■□□□□ 0.96
HTTP42858 AP001269.4-201ENST00000609611 512 ntBASIC21.05■□□□□ 0.96
HTTP42858 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HTTP42858 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.05■□□□□ 0.96
HTTP42858 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.05■□□□□ 0.96
HTTP42858 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.05■□□□□ 0.96
HTTP42858 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HTTP42858 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.05■□□□□ 0.96
HTTP42858 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.05■□□□□ 0.96
HTTP42858 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.05■□□□□ 0.96
HTTP42858 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HTTP42858 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTTP42858 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.05■□□□□ 0.96
HTTP42858 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 AC093909.1-201ENST00000504731 1122 ntBASIC21.04■□□□□ 0.96
HTTP42858 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.04■□□□□ 0.96
HTTP42858 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
HTTP42858 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HTTP42858 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTTP42858 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HTTP42858 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.04■□□□□ 0.96
HTTP42858 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
HTTP42858 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.03■□□□□ 0.96
HTTP42858 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HTTP42858 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.03■□□□□ 0.96
HTTP42858 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 AC132008.2-207ENST00000454517 770 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms