Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 AL031133.1-201ENST00000406807 723 ntBASIC19.25■□□□□ 0.67
SLC6A4P31645 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC6A4P31645 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC6A4P31645 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 AC112497.1-201ENST00000624824 639 ntBASIC19.25■□□□□ 0.67
SLC6A4P31645 AC083906.6-201ENST00000641366 219 ntBASIC19.25■□□□□ 0.67
SLC6A4P31645 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A4P31645 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 AL357033.4-201ENST00000617703 1807 ntBASIC19.25■□□□□ 0.67
SLC6A4P31645 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC6A4P31645 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A4P31645 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC6A4P31645 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC6A4P31645 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 STARP1-201ENST00000397973 869 ntBASIC19.24■□□□□ 0.67
SLC6A4P31645 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 KRT18P23-201ENST00000435622 1283 ntBASIC19.24■□□□□ 0.67
SLC6A4P31645 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC6A4P31645 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A4P31645 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A4P31645 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A4P31645 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 AC006333.2-201ENST00000607957 2099 ntBASIC19.23■□□□□ 0.67
SLC6A4P31645 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC6A4P31645 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A4P31645 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A4P31645 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SLC6A4P31645 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC6A4P31645 Z98044.1-201ENST00000632503 1764 ntBASIC19.22■□□□□ 0.67
SLC6A4P31645 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A4P31645 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC6A4P31645 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC6A4P31645 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A4P31645 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.22■□□□□ 0.67
SLC6A4P31645 AC112907.2-201ENST00000448639 330 ntBASIC19.22■□□□□ 0.67
SLC6A4P31645 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms