Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CTGFP29279 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.13■□□□□ 0.97
CTGFP29279 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.13■□□□□ 0.97
CTGFP29279 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.13■□□□□ 0.97
CTGFP29279 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.13■□□□□ 0.97
CTGFP29279 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.13■□□□□ 0.97
CTGFP29279 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.13■□□□□ 0.97
CTGFP29279 AC116407.3-201ENST00000623905 1129 ntBASIC21.13■□□□□ 0.97
CTGFP29279 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTGFP29279 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CTGFP29279 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CTGFP29279 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
CTGFP29279 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 GABARAPL3-202ENST00000624044 1851 ntBASIC21.12■□□□□ 0.97
CTGFP29279 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.12■□□□□ 0.97
CTGFP29279 AC093909.1-201ENST00000504731 1122 ntBASIC21.12■□□□□ 0.97
CTGFP29279 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.12■□□□□ 0.97
CTGFP29279 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.12■□□□□ 0.97
CTGFP29279 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
CTGFP29279 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.12■□□□□ 0.97
CTGFP29279 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.12■□□□□ 0.97
CTGFP29279 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 KRT8P32-201ENST00000512863 1461 ntBASIC21.12■□□□□ 0.97
CTGFP29279 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.12■□□□□ 0.97
CTGFP29279 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CTGFP29279 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTGFP29279 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.11■□□□□ 0.97
CTGFP29279 AC034236.2-201ENST00000606662 1610 ntBASIC21.11■□□□□ 0.97
CTGFP29279 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CTGFP29279 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CTGFP29279 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.11■□□□□ 0.97
CTGFP29279 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 FGFR3P6-201ENST00000457012 610 ntBASIC21.11■□□□□ 0.97
CTGFP29279 AC096582.2-201ENST00000510860 516 ntBASIC21.11■□□□□ 0.97
CTGFP29279 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTGFP29279 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.11■□□□□ 0.97
CTGFP29279 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.11■□□□□ 0.97
CTGFP29279 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CTGFP29279 AC114341.1-201ENST00000618070 349 ntBASIC21.11■□□□□ 0.97
CTGFP29279 AL691403.2-201ENST00000618460 490 ntBASIC21.11■□□□□ 0.97
CTGFP29279 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.11■□□□□ 0.97
CTGFP29279 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CTGFP29279 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.11■□□□□ 0.97
CTGFP29279 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CTGFP29279 AC007375.3-201ENST00000600936 2314 ntBASIC21.11■□□□□ 0.97
CTGFP29279 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.11■□□□□ 0.97
CTGFP29279 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTGFP29279 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.1■□□□□ 0.97
CTGFP29279 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CTGFP29279 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.1■□□□□ 0.97
CTGFP29279 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.1■□□□□ 0.97
CTGFP29279 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.1■□□□□ 0.97
CTGFP29279 LINC02084-201ENST00000606069 1096 ntBASIC21.1■□□□□ 0.97
CTGFP29279 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.1■□□□□ 0.97
CTGFP29279 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.1■□□□□ 0.97
CTGFP29279 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTGFP29279 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CTGFP29279 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
CTGFP29279 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTGFP29279 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms