Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL11A2P13942 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.92■■□□□ 1.26
COL11A2P13942 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
COL11A2P13942 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.92■■□□□ 1.26
COL11A2P13942 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.92■■□□□ 1.26
COL11A2P13942 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.92■■□□□ 1.26
COL11A2P13942 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.92■■□□□ 1.26
COL11A2P13942 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
COL11A2P13942 AC106730.1-201ENST00000566722 1090 ntBASIC22.92■■□□□ 1.26
COL11A2P13942 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC22.92■■□□□ 1.26
COL11A2P13942 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.92■■□□□ 1.26
COL11A2P13942 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
COL11A2P13942 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
COL11A2P13942 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL11A2P13942 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.91■■□□□ 1.26
COL11A2P13942 MIR564-202ENST00000385049 94 ntBASIC22.91■■□□□ 1.26
COL11A2P13942 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.91■■□□□ 1.26
COL11A2P13942 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.91■■□□□ 1.26
COL11A2P13942 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
COL11A2P13942 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.91■■□□□ 1.26
COL11A2P13942 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.91■■□□□ 1.26
COL11A2P13942 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
COL11A2P13942 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.91■■□□□ 1.26
COL11A2P13942 MINOS1P3-201ENST00000457048 203 ntBASIC22.91■■□□□ 1.26
COL11A2P13942 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.91■■□□□ 1.26
COL11A2P13942 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL11A2P13942 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.91■■□□□ 1.26
COL11A2P13942 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
COL11A2P13942 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
COL11A2P13942 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL11A2P13942 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 KRT8P50-201ENST00000562022 1438 ntBASIC22.9■■□□□ 1.26
COL11A2P13942 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.9■■□□□ 1.26
COL11A2P13942 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.9■■□□□ 1.26
COL11A2P13942 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.9■■□□□ 1.26
COL11A2P13942 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL11A2P13942 BX842568.4-201ENST00000421222 227 ntBASIC22.9■■□□□ 1.26
COL11A2P13942 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
COL11A2P13942 AF186996.4-201ENST00000467186 377 ntBASIC22.9■■□□□ 1.26
COL11A2P13942 RNPS1P1-201ENST00000507437 918 ntBASIC22.9■■□□□ 1.26
COL11A2P13942 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.9■■□□□ 1.26
COL11A2P13942 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
COL11A2P13942 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL11A2P13942 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.9■■□□□ 1.26
COL11A2P13942 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
COL11A2P13942 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
COL11A2P13942 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.89■■□□□ 1.26
COL11A2P13942 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL11A2P13942 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.89■■□□□ 1.26
COL11A2P13942 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.89■■□□□ 1.26
COL11A2P13942 PGAM5P1-201ENST00000518923 814 ntBASIC22.89■■□□□ 1.26
COL11A2P13942 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.89■■□□□ 1.26
COL11A2P13942 AC139887.3-201ENST00000568585 713 ntBASIC22.89■■□□□ 1.26
COL11A2P13942 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.89■■□□□ 1.26
COL11A2P13942 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.89■■□□□ 1.26
COL11A2P13942 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.89■■□□□ 1.26
COL11A2P13942 AC114341.1-201ENST00000618070 349 ntBASIC22.89■■□□□ 1.26
COL11A2P13942 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL11A2P13942 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.89■■□□□ 1.25
COL11A2P13942 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL11A2P13942 TREX1-205ENST00000625293 1783 ntBASIC22.89■■□□□ 1.25
COL11A2P13942 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.89■■□□□ 1.25
COL11A2P13942 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.89■■□□□ 1.25
COL11A2P13942 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL11A2P13942 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL11A2P13942 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL11A2P13942 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.89■■□□□ 1.25
COL11A2P13942 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 AC145285.3-201ENST00000564603 959 ntBASIC22.88■■□□□ 1.25
COL11A2P13942 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.88■■□□□ 1.25
COL11A2P13942 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms