Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN1P07384 MIR1224-201ENST00000408193 85 ntBASIC18.46■□□□□ 0.55
CAPN1P07384 MIR1238-201ENST00000408483 83 ntBASIC18.46■□□□□ 0.55
CAPN1P07384 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN1P07384 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 FITM1-202ENST00000559294 800 ntBASIC18.46■□□□□ 0.55
CAPN1P07384 AC145285.6-201ENST00000604632 637 ntBASIC18.46■□□□□ 0.55
CAPN1P07384 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.46■□□□□ 0.55
CAPN1P07384 AL031985.4-201ENST00000642138 673 ntBASIC18.46■□□□□ 0.55
CAPN1P07384 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CAPN1P07384 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CAPN1P07384 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
CAPN1P07384 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPN1P07384 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.46■□□□□ 0.55
CAPN1P07384 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN1P07384 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
CAPN1P07384 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CAPN1P07384 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.46■□□□□ 0.54
CAPN1P07384 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CAPN1P07384 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CAPN1P07384 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN1P07384 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN1P07384 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPN1P07384 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.45■□□□□ 0.54
CAPN1P07384 AL390955.1-201ENST00000428694 934 ntBASIC18.45■□□□□ 0.54
CAPN1P07384 TSPY21P-201ENST00000433481 731 ntBASIC18.45■□□□□ 0.54
CAPN1P07384 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.45■□□□□ 0.54
CAPN1P07384 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPN1P07384 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CAPN1P07384 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.45■□□□□ 0.54
CAPN1P07384 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN1P07384 MIR6786-201ENST00000616843 113 ntBASIC18.45■□□□□ 0.54
CAPN1P07384 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CAPN1P07384 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN1P07384 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CAPN1P07384 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN1P07384 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN1P07384 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 AC004980.1-204ENST00000429707 299 ntBASIC18.44■□□□□ 0.54
CAPN1P07384 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
CAPN1P07384 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN1P07384 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN1P07384 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CAPN1P07384 WIZP1-201ENST00000531444 2299 ntBASIC18.44■□□□□ 0.54
CAPN1P07384 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 CYP2D8P-201ENST00000433633 1490 ntBASIC18.44■□□□□ 0.54
CAPN1P07384 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN1P07384 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 AC009113.1-201ENST00000570267 2443 ntBASIC18.43■□□□□ 0.54
CAPN1P07384 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.43■□□□□ 0.54
CAPN1P07384 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
CAPN1P07384 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.43■□□□□ 0.54
CAPN1P07384 AC026271.3-201ENST00000571884 352 ntBASIC18.43■□□□□ 0.54
CAPN1P07384 AC010331.1-201ENST00000611423 582 ntBASIC18.43■□□□□ 0.54
CAPN1P07384 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms