Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.01■□□□□ 0.31
HMGN1P05114 C1QL1P1-201ENST00000568105 661 ntBASIC17.01■□□□□ 0.31
HMGN1P05114 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGN1P05114 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.01■□□□□ 0.31
HMGN1P05114 AC004264.1-201ENST00000608354 794 ntBASIC17.01■□□□□ 0.31
HMGN1P05114 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.01■□□□□ 0.31
HMGN1P05114 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 MYC-208ENST00000641036 567 ntBASIC17.01■□□□□ 0.31
HMGN1P05114 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HMGN1P05114 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGN1P05114 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17■□□□□ 0.31
HMGN1P05114 KATNBL1P6-202ENST00000562413 1466 ntBASIC17■□□□□ 0.31
HMGN1P05114 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17■□□□□ 0.31
HMGN1P05114 RCC2P6-201ENST00000526625 1557 ntBASIC17■□□□□ 0.31
HMGN1P05114 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17■□□□□ 0.31
HMGN1P05114 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
HMGN1P05114 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17■□□□□ 0.31
HMGN1P05114 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGN1P05114 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGN1P05114 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HMGN1P05114 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGN1P05114 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HMGN1P05114 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGN1P05114 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGN1P05114 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 UNC93B4-201ENST00000505679 747 ntBASIC16.99■□□□□ 0.31
HMGN1P05114 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 AL138781.1-201ENST00000566567 1274 ntBASIC16.99■□□□□ 0.31
HMGN1P05114 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 AC083880.1-201ENST00000608266 535 ntBASIC16.99■□□□□ 0.31
HMGN1P05114 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMGN1P05114 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 AC068880.1-201ENST00000507289 2297 ntBASIC16.99■□□□□ 0.31
HMGN1P05114 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGN1P05114 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 NBPF21P-201ENST00000425093 1451 ntBASIC16.99■□□□□ 0.31
HMGN1P05114 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGN1P05114 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGN1P05114 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGN1P05114 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGN1P05114 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGN1P05114 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HMGN1P05114 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMGN1P05114 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGN1P05114 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGN1P05114 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms