Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 BX323043.1-201ENST00000641006 1765 ntBASIC19.2■□□□□ 0.66
MT-CO1P00395 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MT-CO1P00395 AL023284.2-201ENST00000405850 579 ntBASIC19.2■□□□□ 0.66
MT-CO1P00395 AC117947.1-201ENST00000427448 529 ntBASIC19.2■□□□□ 0.66
MT-CO1P00395 DUX4L26-201ENST00000489078 1255 ntBASIC19.2■□□□□ 0.66
MT-CO1P00395 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-CO1P00395 AL049597.2-201ENST00000565575 961 ntBASIC19.2■□□□□ 0.66
MT-CO1P00395 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MT-CO1P00395 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-CO1P00395 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MT-CO1P00395 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MT-CO1P00395 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MT-CO1P00395 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
MT-CO1P00395 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-CO1P00395 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-CO1P00395 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-CO1P00395 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MT-CO1P00395 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
MT-CO1P00395 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MT-CO1P00395 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-CO1P00395 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-CO1P00395 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MT-CO1P00395 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MT-CO1P00395 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
MT-CO1P00395 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 AL161938.1-201ENST00000569833 2180 ntBASIC19.19■□□□□ 0.66
MT-CO1P00395 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO1P00395 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-CO1P00395 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-CO1P00395 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.18■□□□□ 0.66
MT-CO1P00395 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
MT-CO1P00395 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-CO1P00395 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-CO1P00395 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.18■□□□□ 0.66
MT-CO1P00395 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 CR769767.2-201ENST00000622735 460 ntBASIC19.18■□□□□ 0.66
MT-CO1P00395 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO1P00395 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MT-CO1P00395 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MT-CO1P00395 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-CO1P00395 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MT-CO1P00395 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-CO1P00395 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.17■□□□□ 0.66
MT-CO1P00395 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MT-CO1P00395 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MT-CO1P00395 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO1P00395 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MT-CO1P00395 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms