Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 FGFR3P6-201ENST00000457012 610 ntBASIC21.38■■□□□ 1.01
ALDH1A1P00352 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.38■■□□□ 1.01
ALDH1A1P00352 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.38■■□□□ 1.01
ALDH1A1P00352 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALDH1A1P00352 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 RPSAP43-201ENST00000402237 625 ntBASIC21.37■■□□□ 1.01
ALDH1A1P00352 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 MIR3687-2-201ENST00000577708 61 ntBASIC21.37■■□□□ 1.01
ALDH1A1P00352 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 MIR3687-1-201ENST00000614492 61 ntBASIC21.37■■□□□ 1.01
ALDH1A1P00352 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALDH1A1P00352 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.37■■□□□ 1.01
ALDH1A1P00352 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 MED15P5-201ENST00000423150 992 ntBASIC21.36■■□□□ 1.01
ALDH1A1P00352 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ALDH1A1P00352 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.36■■□□□ 1.01
ALDH1A1P00352 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.36■■□□□ 1.01
ALDH1A1P00352 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
ALDH1A1P00352 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.35■■□□□ 1.01
ALDH1A1P00352 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 GPX1P2-201ENST00000429271 606 ntBASIC21.35■■□□□ 1.01
ALDH1A1P00352 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.35■■□□□ 1.01
ALDH1A1P00352 HNRNPDP1-201ENST00000439535 754 ntBASIC21.35■■□□□ 1.01
ALDH1A1P00352 DNAJB3-201ENST00000446806 729 ntBASIC21.35■■□□□ 1.01
ALDH1A1P00352 AC104109.2-201ENST00000602919 1418 ntBASIC21.35■■□□□ 1.01
ALDH1A1P00352 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ALDH1A1P00352 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ALDH1A1P00352 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ALDH1A1P00352 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms