Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 INGX-201ENST00000359239 846 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.66■□□□□ 0.26
CNOT4O95628 AP000523.1-201ENST00000398242 1049 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 BX664615.1-201ENST00000443558 458 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CNOT4O95628 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
CNOT4O95628 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.66■□□□□ 0.26
CNOT4O95628 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CNOT4O95628 AL031432.5-201ENST00000641059 760 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT4O95628 HTR7P1-202ENST00000624664 4411 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CNOT4O95628 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT4O95628 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.66■□□□□ 0.26
CNOT4O95628 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
CNOT4O95628 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.65■□□□□ 0.26
CNOT4O95628 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 AL138966.2-201ENST00000621997 464 ntBASIC16.65■□□□□ 0.26
CNOT4O95628 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 AC093484.2-201ENST00000580996 2166 ntBASIC16.65■□□□□ 0.26
CNOT4O95628 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNOT4O95628 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT4O95628 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT4O95628 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CNOT4O95628 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CNOT4O95628 AL032819.2-201ENST00000624543 2162 ntBASIC16.64■□□□□ 0.25
CNOT4O95628 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CNOT4O95628 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CNOT4O95628 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.64■□□□□ 0.25
CNOT4O95628 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.64■□□□□ 0.25
CNOT4O95628 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.64■□□□□ 0.25
CNOT4O95628 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT4O95628 AC010203.1-204ENST00000548782 407 ntBASIC16.64■□□□□ 0.25
CNOT4O95628 NEK4P2-201ENST00000580004 1012 ntBASIC16.64■□□□□ 0.25
CNOT4O95628 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CNOT4O95628 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CNOT4O95628 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNOT4O95628 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT4O95628 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT4O95628 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.64■□□□□ 0.25
CNOT4O95628 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.64■□□□□ 0.25
CNOT4O95628 IRX1P1-201ENST00000438849 1838 ntBASIC16.63■□□□□ 0.25
CNOT4O95628 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT4O95628 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT4O95628 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT4O95628 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNOT4O95628 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT4O95628 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT4O95628 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT4O95628 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT4O95628 WWOX-216ENST00000569818 525 ntBASIC16.63■□□□□ 0.25
CNOT4O95628 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT4O95628 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms