Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SMAD6O43541 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD6O43541 AL357033.4-201ENST00000617703 1807 ntBASIC18.95■□□□□ 0.62
SMAD6O43541 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD6O43541 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD6O43541 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMAD6O43541 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 SPDYE15P-201ENST00000424157 909 ntBASIC18.95■□□□□ 0.62
SMAD6O43541 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD6O43541 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 AC112497.1-201ENST00000624824 639 ntBASIC18.95■□□□□ 0.62
SMAD6O43541 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.95■□□□□ 0.62
SMAD6O43541 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD6O43541 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMAD6O43541 AC006333.2-201ENST00000607957 2099 ntBASIC18.94■□□□□ 0.62
SMAD6O43541 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD6O43541 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD6O43541 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 AL031133.1-201ENST00000406807 723 ntBASIC18.94■□□□□ 0.62
SMAD6O43541 KRT18P23-201ENST00000435622 1283 ntBASIC18.94■□□□□ 0.62
SMAD6O43541 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SMAD6O43541 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD6O43541 AC083906.6-201ENST00000641366 219 ntBASIC18.94■□□□□ 0.62
SMAD6O43541 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD6O43541 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD6O43541 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMAD6O43541 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD6O43541 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD6O43541 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD6O43541 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD6O43541 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMAD6O43541 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
SMAD6O43541 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMAD6O43541 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD6O43541 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMAD6O43541 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMAD6O43541 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 Z98044.1-201ENST00000632503 1764 ntBASIC18.92■□□□□ 0.62
SMAD6O43541 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
SMAD6O43541 STARP1-201ENST00000397973 869 ntBASIC18.92■□□□□ 0.62
SMAD6O43541 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD6O43541 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.92■□□□□ 0.62
SMAD6O43541 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD6O43541 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD6O43541 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.92■□□□□ 0.62
SMAD6O43541 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD6O43541 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD6O43541 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms