Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RRP8O43159 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RRP8O43159 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RRP8O43159 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RRP8O43159 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RRP8O43159 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.61■□□□□ 0.41
RRP8O43159 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RRP8O43159 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.61■□□□□ 0.41
RRP8O43159 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RRP8O43159 BX842568.4-201ENST00000421222 227 ntBASIC17.6■□□□□ 0.41
RRP8O43159 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RRP8O43159 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 RNPS1P1-201ENST00000507437 918 ntBASIC17.6■□□□□ 0.41
RRP8O43159 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.6■□□□□ 0.41
RRP8O43159 AC005332.3-201ENST00000589904 676 ntBASIC17.6■□□□□ 0.41
RRP8O43159 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
RRP8O43159 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.6■□□□□ 0.41
RRP8O43159 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RRP8O43159 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
RRP8O43159 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.59■□□□□ 0.41
RRP8O43159 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RRP8O43159 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RRP8O43159 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RRP8O43159 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 FAM197Y8-203ENST00000450145 560 ntBASIC17.59■□□□□ 0.41
RRP8O43159 AF186996.4-201ENST00000467186 377 ntBASIC17.59■□□□□ 0.41
RRP8O43159 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.59■□□□□ 0.41
RRP8O43159 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RRP8O43159 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.59■□□□□ 0.41
RRP8O43159 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.59■□□□□ 0.41
RRP8O43159 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
RRP8O43159 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RRP8O43159 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RRP8O43159 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RRP8O43159 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RRP8O43159 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RRP8O43159 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RRP8O43159 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RRP8O43159 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RRP8O43159 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 AKR1C7P-201ENST00000305623 895 ntBASIC17.58■□□□□ 0.4
RRP8O43159 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.58■□□□□ 0.4
RRP8O43159 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 GUSBP12-201ENST00000513727 720 ntBASIC17.58■□□□□ 0.4
RRP8O43159 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
RRP8O43159 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.58■□□□□ 0.4
RRP8O43159 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.58■□□□□ 0.4
RRP8O43159 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.58■□□□□ 0.4
RRP8O43159 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RRP8O43159 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RRP8O43159 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.57■□□□□ 0.4
RRP8O43159 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms