Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMX2-CTNND1H3BSU7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 AL671277.2-201ENST00000458060 996 ntBASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 NEK4P2-201ENST00000580004 1012 ntBASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 IER3-202ENST00000376377 1350 ntBASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMX2-CTNND1H3BSU7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 KRT8P41-201ENST00000533985 1514 ntBASIC18.39■□□□□ 0.54
TMX2-CTNND1H3BSU7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 FAM86EP-206ENST00000510506 987 ntBASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMX2-CTNND1H3BSU7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 AC009237.14-201ENST00000609975 1594 ntBASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMX2-CTNND1H3BSU7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMX2-CTNND1H3BSU7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.37■□□□□ 0.53
TMX2-CTNND1H3BSU7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMX2-CTNND1H3BSU7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
TMX2-CTNND1H3BSU7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TMX2-CTNND1H3BSU7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms