Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 KRT89P-201ENST00000620027 1478 ntBASIC21.84■■□□□ 1.09
SSC5DA1L4H1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 KRT18P13-201ENST00000400056 1290 ntBASIC21.83■■□□□ 1.09
SSC5DA1L4H1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 VENTXP7-201ENST00000475503 772 ntBASIC21.83■■□□□ 1.09
SSC5DA1L4H1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 LINC01006-201ENST00000333319 2292 ntBASIC21.83■■□□□ 1.09
SSC5DA1L4H1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSC5DA1L4H1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SSC5DA1L4H1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SSC5DA1L4H1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SSC5DA1L4H1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SSC5DA1L4H1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 AC018712.1-201ENST00000455767 687 ntBASIC21.82■■□□□ 1.08
SSC5DA1L4H1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 IRX1P1-201ENST00000438849 1838 ntBASIC21.82■■□□□ 1.08
SSC5DA1L4H1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.82■■□□□ 1.08
SSC5DA1L4H1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 AL031284.1-201ENST00000419297 478 ntBASIC21.81■■□□□ 1.08
SSC5DA1L4H1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSC5DA1L4H1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 FAM197Y8-203ENST00000450145 560 ntBASIC21.8■■□□□ 1.08
SSC5DA1L4H1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.8■■□□□ 1.08
SSC5DA1L4H1 AL049840.3-201ENST00000602669 611 ntBASIC21.8■■□□□ 1.08
SSC5DA1L4H1 AC117500.6-201ENST00000624871 588 ntBASIC21.8■■□□□ 1.08
SSC5DA1L4H1 AC068587.9-201ENST00000641814 219 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms