Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pfdn5Q9WU28 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pfdn5Q9WU28 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pfdn5Q9WU28 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pfdn5Q9WU28 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn5Q9WU28 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn5Q9WU28 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn5Q9WU28 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn5Q9WU28 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn5Q9WU28 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.64■□□□□ 0.57
Pfdn5Q9WU28 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn5Q9WU28 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn5Q9WU28 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn5Q9WU28 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pfdn5Q9WU28 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Pfdn5Q9WU28 Gm16148-201ENSMUST00000119653 893 ntBASIC18.63■□□□□ 0.57
Pfdn5Q9WU28 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn5Q9WU28 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn5Q9WU28 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn5Q9WU28 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn5Q9WU28 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn5Q9WU28 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Notumos-201ENSMUST00000151998 2659 ntBASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn5Q9WU28 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pfdn5Q9WU28 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pfdn5Q9WU28 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pfdn5Q9WU28 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pfdn5Q9WU28 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pfdn5Q9WU28 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Gm24804-201ENSMUST00000174982 85 ntBASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pfdn5Q9WU28 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pfdn5Q9WU28 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pfdn5Q9WU28 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn5Q9WU28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn5Q9WU28 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn5Q9WU28 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Pfdn5Q9WU28 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn5Q9WU28 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pfdn5Q9WU28 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
Pfdn5Q9WU28 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn5Q9WU28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pfdn5Q9WU28 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn5Q9WU28 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn5Q9WU28 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn5Q9WU28 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn5Q9WU28 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn5Q9WU28 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn5Q9WU28 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn5Q9WU28 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms