Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nrip3Q9JJR9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nrip3Q9JJR9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nrip3Q9JJR9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nrip3Q9JJR9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nrip3Q9JJR9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nrip3Q9JJR9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nrip3Q9JJR9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nrip3Q9JJR9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nrip3Q9JJR9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nrip3Q9JJR9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nrip3Q9JJR9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nrip3Q9JJR9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nrip3Q9JJR9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.72■□□□□ 0.91
Nrip3Q9JJR9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nrip3Q9JJR9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Nrip3Q9JJR9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nrip3Q9JJR9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nrip3Q9JJR9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.71■□□□□ 0.91
Nrip3Q9JJR9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.7■□□□□ 0.9
Nrip3Q9JJR9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nrip3Q9JJR9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nrip3Q9JJR9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nrip3Q9JJR9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nrip3Q9JJR9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
Nrip3Q9JJR9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrip3Q9JJR9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrip3Q9JJR9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nrip3Q9JJR9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrip3Q9JJR9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nrip3Q9JJR9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.67■□□□□ 0.9
Nrip3Q9JJR9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nrip3Q9JJR9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nrip3Q9JJR9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nrip3Q9JJR9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nrip3Q9JJR9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.66■□□□□ 0.9
Nrip3Q9JJR9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nrip3Q9JJR9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nrip3Q9JJR9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrip3Q9JJR9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrip3Q9JJR9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrip3Q9JJR9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrip3Q9JJR9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nrip3Q9JJR9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nrip3Q9JJR9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrip3Q9JJR9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrip3Q9JJR9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrip3Q9JJR9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrip3Q9JJR9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 Gm45855-201ENSMUST00000212546 880 ntBASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nrip3Q9JJR9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nrip3Q9JJR9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nrip3Q9JJR9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Nrip3Q9JJR9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nrip3Q9JJR9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrip3Q9JJR9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrip3Q9JJR9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrip3Q9JJR9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrip3Q9JJR9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrip3Q9JJR9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nrip3Q9JJR9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nrip3Q9JJR9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nrip3Q9JJR9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nrip3Q9JJR9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Nrip3Q9JJR9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Nrip3Q9JJR9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrip3Q9JJR9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nrip3Q9JJR9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms