Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raf1Q99N57 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Raf1Q99N57 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Raf1Q99N57 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.43■□□□□ 0.86
Raf1Q99N57 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raf1Q99N57 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raf1Q99N57 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Raf1Q99N57 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raf1Q99N57 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raf1Q99N57 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.4■□□□□ 0.86
Raf1Q99N57 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raf1Q99N57 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Raf1Q99N57 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Raf1Q99N57 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Raf1Q99N57 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Raf1Q99N57 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.39■□□□□ 0.85
Raf1Q99N57 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Raf1Q99N57 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Raf1Q99N57 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.38■□□□□ 0.85
Raf1Q99N57 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Raf1Q99N57 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raf1Q99N57 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Raf1Q99N57 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Raf1Q99N57 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raf1Q99N57 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raf1Q99N57 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raf1Q99N57 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raf1Q99N57 Nkain2-201ENSMUST00000092602 558 ntBASIC20.37■□□□□ 0.85
Raf1Q99N57 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raf1Q99N57 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raf1Q99N57 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Raf1Q99N57 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raf1Q99N57 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raf1Q99N57 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raf1Q99N57 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raf1Q99N57 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raf1Q99N57 Particl-201ENSMUST00000205370 1560 ntBASIC20.35■□□□□ 0.85
Raf1Q99N57 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.35■□□□□ 0.85
Raf1Q99N57 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raf1Q99N57 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raf1Q99N57 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raf1Q99N57 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raf1Q99N57 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.34■□□□□ 0.85
Raf1Q99N57 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Raf1Q99N57 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raf1Q99N57 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.33■□□□□ 0.85
Raf1Q99N57 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.33■□□□□ 0.85
Raf1Q99N57 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.33■□□□□ 0.85
Raf1Q99N57 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Raf1Q99N57 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raf1Q99N57 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Raf1Q99N57 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Raf1Q99N57 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Raf1Q99N57 Gm7432-201ENSMUST00000210343 879 ntBASIC20.32■□□□□ 0.84
Raf1Q99N57 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raf1Q99N57 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Raf1Q99N57 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raf1Q99N57 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raf1Q99N57 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.31■□□□□ 0.84
Raf1Q99N57 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Raf1Q99N57 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raf1Q99N57 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raf1Q99N57 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Raf1Q99N57 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raf1Q99N57 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Raf1Q99N57 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raf1Q99N57 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raf1Q99N57 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raf1Q99N57 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raf1Q99N57 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raf1Q99N57 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.27■□□□□ 0.84
Raf1Q99N57 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Raf1Q99N57 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Raf1Q99N57 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Raf1Q99N57 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Raf1Q99N57 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raf1Q99N57 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raf1Q99N57 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Raf1Q99N57 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Raf1Q99N57 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Raf1Q99N57 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raf1Q99N57 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Raf1Q99N57 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raf1Q99N57 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.25■□□□□ 0.83
Raf1Q99N57 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raf1Q99N57 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.25■□□□□ 0.83
Raf1Q99N57 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Raf1Q99N57 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raf1Q99N57 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.23■□□□□ 0.83
Raf1Q99N57 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms