Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf111Q99ML9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf111Q99ML9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.27■■□□□ 1.16
Rnf111Q99ML9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf111Q99ML9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf111Q99ML9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf111Q99ML9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.26■■□□□ 1.15
Rnf111Q99ML9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.26■■□□□ 1.15
Rnf111Q99ML9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Gm6821-201ENSMUST00000107540 542 ntBASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf111Q99ML9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf111Q99ML9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf111Q99ML9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf111Q99ML9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf111Q99ML9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf111Q99ML9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf111Q99ML9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rnf111Q99ML9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf111Q99ML9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Rnf111Q99ML9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf111Q99ML9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.18■■□□□ 1.14
Rnf111Q99ML9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.18■■□□□ 1.14
Rnf111Q99ML9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf111Q99ML9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf111Q99ML9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf111Q99ML9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.16■■□□□ 1.14
Rnf111Q99ML9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf111Q99ML9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.16■■□□□ 1.14
Rnf111Q99ML9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rnf111Q99ML9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.14■■□□□ 1.13
Rnf111Q99ML9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf111Q99ML9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf111Q99ML9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf111Q99ML9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.12■■□□□ 1.13
Rnf111Q99ML9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.12■■□□□ 1.13
Rnf111Q99ML9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf111Q99ML9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf111Q99ML9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf111Q99ML9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rnf111Q99ML9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.07■■□□□ 1.12
Rnf111Q99ML9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rnf111Q99ML9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms