Protein–RNA interactions for Protein: Q920C1

Chrdl1, Chordin-like protein 1, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrdl1Q920C1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrdl1Q920C1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Chrdl1Q920C1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrdl1Q920C1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrdl1Q920C1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.46■□□□□ 0.54
Chrdl1Q920C1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrdl1Q920C1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chrdl1Q920C1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrdl1Q920C1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.43■□□□□ 0.54
Chrdl1Q920C1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrdl1Q920C1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrdl1Q920C1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chrdl1Q920C1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrdl1Q920C1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrdl1Q920C1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrdl1Q920C1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrdl1Q920C1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.41■□□□□ 0.54
Chrdl1Q920C1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrdl1Q920C1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.4■□□□□ 0.54
Chrdl1Q920C1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chrdl1Q920C1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrdl1Q920C1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrdl1Q920C1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chrdl1Q920C1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chrdl1Q920C1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.37■□□□□ 0.53
Chrdl1Q920C1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.37■□□□□ 0.53
Chrdl1Q920C1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chrdl1Q920C1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrdl1Q920C1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Chrdl1Q920C1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.34■□□□□ 0.53
Chrdl1Q920C1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrdl1Q920C1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrdl1Q920C1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrdl1Q920C1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrdl1Q920C1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrdl1Q920C1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrdl1Q920C1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chrdl1Q920C1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrdl1Q920C1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrdl1Q920C1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chrdl1Q920C1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chrdl1Q920C1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chrdl1Q920C1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chrdl1Q920C1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrdl1Q920C1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrdl1Q920C1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms